BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E06LP1|AL425874
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1511 0.0
>3x_Contig1503
Length = 10719
Score = 1511 bits (758), Expect = 0.0
Identities = 793/809 (98%)
Strand = Plus / Minus
Query: 1 cgcaaagattaaagtcagagatgaattgcgtgaggtagacaagcagagagaagatgattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5623 cgcaaagattaaagtcagagatgaattgcgtgaggtagacaagcagagagaagatgattt 5564
Query: 61 aaaggaattcaaccaaaacattctcgaacatgtgccactatctttgactccagctgaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5563 aaaggaattcaaccaaaacattctcgaacatgtgccactatctttgactccagctgaaag 5504
Query: 121 gtacgagacacaaatggctcttgaagaaagcyaaagagagccttggttagcagaatttgc 180
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 5503 gtacgagacacaaatggctcttgaagaaagcaaaagagagcattggttagcagaatttgc 5444
Query: 181 gaaanaattccctaaagatctaagacaaggtgaaaatccatcttctgtatacaatttgat 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5443 gaaaaaattccctaaagatctaagacaaggtgaaaatccatcttctgtatacaatttgat 5384
Query: 241 cggtgtcgttacacatcaaggtgctaattccgacagtggacattaccaggcctttgtcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5383 cggtgtcgttacacatcaaggtgctaattccgacagtggacattaccaggcctttgtcag 5324
Query: 301 ggatgacgcggacgagaattaatggtacaaatataatgatgacaaagtatacgttgttac 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5323 ggatgacgcggacgagaataaatggtacaaatataatgatgacaaagtatacgttgttac 5264
Query: 361 aagggaaaaggttgagccattggctggtggtggtgaaagtgacagtgctttaattcttat 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5263 aagggaaaaggttgagcaattggctggtggtggtgaaagtgacagtgctttaattcttat 5204
Query: 421 ctacaaagggtttgggttatgaaaatgatacgttgataagtatatcctaaatgaatgtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5203 ctacaaagggtttgggttatgaaaatgatacgttgataagtatatcctaaatgaatgtgc 5144
Query: 481 tttcgacttatttacttaacctgagcctatatagtaatattathwctgttattcattctt 540
|||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 5143 tttcgacttatttacttaacctgagcatatatagtaatattataactgtaattcattctt 5084
Query: 541 ccccgacaaatactattcatgctagtgaatatacatgttcatggctaavatggtgccgtt 600
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 5083 ccccgacaaatactattcatgctagtgaatatacatgtacatggctaaaatggtgccgtt 5024
Query: 601 tcttaacattttatggttctcattatgtgagaatttgtgatatgatgagtagtaaaatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5023 tcttaacattttatggttctcattatgtgagaatttgtgatatgatgagtagtaaaatgc 4964
Query: 661 aagagggaacgctgagaataatttatcaggaaaaatggcgttagawgtttcccgataaat 720
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 4963 aagagggaacgctgagaataatttatcaggaaaaatggcgtaagaagtttcccgataaat 4904
Query: 721 gaaatacttgggagadagtagtgaatactgttattcataaatgatttcttgattwagaaa 780
||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 4903 gaaatacttgggagaaagtagtgaatactgtaattcataaatgatttcttgattaagaaa 4844
Query: 781 ggtaacgcttttatgcaatggaacacaac 809
|||||||||||||||||||||||||||||
Sbjct: 4843 ggtaacgcttttatgcaatggaacacaac 4815
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5481
Number of Sequences: 1807
Number of extensions: 5481
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)